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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898927.1_cds_XP_016448868.1_43479
CDS Infomation

[gene=LOC107773947] [db_xref=GeneID:107773947] [protein=E3 ubiquitin-protein ligase RNF144A-like isoform X2] [protein_id=XP_016448868.1] [location=join(731..1626,2748..2820)] [gbkey=CDS]
Sequence

ATGGAAGTGGCAACTACTTCGGCCGTGAAAATAATAGATATAGTCGAAGATAACGACGAC
AATGATGATATTTCAGTGATATATGAAACCCCAAAAACTTCAAATGGTAAAGGAATCAAG
ATTAGTGAAAAATACTTAGAGAAAAGAGACGTCGAACTTGAGATTGTAGCATCTTTTTGT
TCAAAACCTAGCAGCAATGGAACTAAAAAGGTCTTTATTGATCTATCCAGAGAATATCCA
GATGATGAGATTCAAATTTTGGGTAGTCAAAATTTACGAAAATGTTCAAAAGGGTGTTCA
AATTCGAAGTCTATTGATATAGATGATGACCAAGATGACATTTTTACCTGTGATATTTGC
GTTGACGAAAAGACAACGAGTGAAATGTTCAAAATAATGGGATGCACTCATTCTTATTGC
AAAGAATGCATGGCTAAGTATGTTGCCTCAAAAATTCAAGAGAATATTTCTCAAATTTCA
TGTCCTGTTTCGGGGTGTAACGGGCTATTAGAGCCGTACTATTGTCGTTCAATTTTGCCT
AAAGAAGTGTTTGATAGATGGGGTGACGCGTTATGTGAGAAAATGATTTTGGGGTCCCAG
AAATTTTATTGTCCGTTTAAGGATTGTTCCGCGCTTTTGATTGATGAAAGCGAGGGTGGA
AATTTTGTTATAACTCAATCGGAATGTCCAGAATGTAGGAGGTTGTTTTGTGCTAAGTGT
AAAGTTGCTTGGCATTCGGGGATTGTGTGTGAAGAATTTGAGAAGTTGAACAAAGATGAA
AGGGAAAGAGAAGATATACAACTTATGCAACTTGCTAAAGGGCAAGAATGGCAGAGATGT
CCGAAGTGTAGGATGTATGTGGCAAGGTCTGATGGTTGTGCCCAAATGCTTTGCAGGTGT
GGCTGTTACTTTTGTTACAAATGTGGAGCTGAGTCAACAAATCATTTTTGCAGTCACTGT
GGTACATAA

Peptide Sequence

PEP ID

XP_016448868.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RNF144A-like isoform X2 [Nicotiana tabacum]
Sequence

MEVATTSAVKIIDIVEDNDDNDDISVIYETPKTSNGKGIKISEKYLEKRDVELEIVASFC
SKPSSNGTKKVFIDLSREYPDDEIQILGSQNLRKCSKGCSNSKSIDIDDDQDDIFTCDIC
VDEKTTSEMFKIMGCTHSYCKECMAKYVASKIQENISQISCPVSGCNGLLEPYYCRSILP
KEVFDRWGDALCEKMILGSQKFYCPFKDCSALLIDESEGGNFVITQSECPECRRLFCAKC
KVAWHSGIVCEEFEKLNKDEREREDIQLMQLAKGQEWQRCPKCRMYVARSDGCAQMLCRC
GCYFCYKCGAESTNHFCSHCGT

Transcript Sequence

Gene sequence data has not been registered.